Put a straight edge across the teeth of the crankshaft and camshaft gears and see if they are aligned. If they are not aligned put a feeler gauge under the straight edge and that will tell you how much shimming you need to take out or put in to bring the crankshaft gear into line with the camshaft gear.
3 thou crankshaft end float is correct.
The correct end float for the camshaft is 0.003" - 0.007".
Picture extracted from David Vizard's book How To Modify Your Mini.[frame]